feat: Add vector search (#2535)

- Initializing the store with an 'embedding config' -> this contains the
'dims' (used to create the table) and the encoder object (rn langchain
embeddings object, though that is ......)
- Call setup() -> creates the vector table.

Each document has 1 or more vectors associated with it for each json
path in the embedding config.

Would welcome critique and requests! 

Leaving the params as the defaults for pgvector but open to feedback if
you think it's important to be able to more transparently configure that
in setup()

```python
from typing import TypedDict, List, Dict, Any, Optional

from langchain_openai import OpenAIEmbeddings
from langgraph.graph import StateGraph
from langgraph.store.postgres import PostgresStore

emb_config = {
    "dims": 1536,  # OpenAI embedding dimensions
    "embed": OpenAIEmbeddings(model="text-embedding-3-small"),
    "distance_type": "cosine",
}
with PostgresStore.from_conn_string(
    "postgres://postgres:postgres@localhost:5441",
    embedding=emb_config,
) as store:
    store.setup()


# Define the state type for our graph
class State(TypedDict):
    query: str
    results: Optional[List[Dict[str, Any]]]


def put_stuff(state: State) -> State:
    docs = [
        ("doc1", {"text": "red apple in kitchen"}),
        ("doc2", {"text": "blue car in garage"}),
        ("doc3", {"text": "green apple on table"}),
    ]
    for key, value in docs:
        store.put(("docs",), key, value)


def search_stuff(state: State) -> State:
    """Search for documents using vector similarity."""
    results = store.search(("docs",), query=state["query"])

    return {"results": results}


builder = StateGraph(State)
builder.add_node(put_stuff)
builder.add_node(search_stuff)
builder.add_edge("__start__", "put_stuff")
builder.add_edge("put_stuff", "search_stuff")
# Compile
with PostgresStore.from_conn_string(
    "postgres://postgres:postgres@localhost:5441",
    embedding=emb_config,
) as store:
    chain = builder.compile(store=store)

    result = chain.invoke({"query": "sour apple"})

# Print results
for doc in result["results"]:
    print(doc.key)
    print(doc.value)
    print(doc.response_metadata)

```
This commit is contained in:
William FH
2024-11-28 04:40:12 +00:00
committed by GitHub
parent 07ac016e60
commit d767af421b
18 changed files with 1382 additions and 428 deletions
@@ -1,16 +1,8 @@
import asyncio
import logging
from collections.abc import AsyncIterator, Iterable, Sequence
from contextlib import asynccontextmanager
from typing import (
Any,
AsyncIterator,
Callable,
Iterable,
Optional,
Sequence,
Union,
cast,
)
from typing import Any, Callable, Optional, Union, cast
import orjson
from psycopg import AsyncConnection, AsyncCursor, AsyncPipeline, Capabilities
@@ -19,13 +11,23 @@ from psycopg.rows import DictRow, dict_row
from psycopg_pool import AsyncConnectionPool
from langgraph.checkpoint.postgres import _ainternal
from langgraph.store.base import GetOp, ListNamespacesOp, Op, PutOp, Result, SearchOp
from langgraph.store.base import (
GetOp,
ListNamespacesOp,
Op,
PutOp,
Result,
SearchOp,
)
from langgraph.store.base.batch import AsyncBatchedBaseStore
from langgraph.store.postgres.base import (
_PLACEHOLDER,
BasePostgresStore,
PoolConfig,
PostgresIndexConfig,
Row,
_decode_ns_bytes,
_ensure_index_config,
_group_ops,
_row_to_item,
_row_to_search_item,
@@ -35,7 +37,14 @@ logger = logging.getLogger(__name__)
class AsyncPostgresStore(AsyncBatchedBaseStore, BasePostgresStore[_ainternal.Conn]):
__slots__ = ("_deserializer", "pipe", "lock", "supports_pipeline")
__slots__ = (
"_deserializer",
"pipe",
"lock",
"supports_pipeline",
"index_config",
"embeddings",
)
def __init__(
self,
@@ -45,6 +54,7 @@ class AsyncPostgresStore(AsyncBatchedBaseStore, BasePostgresStore[_ainternal.Con
deserializer: Optional[
Callable[[Union[bytes, orjson.Fragment]], dict[str, Any]]
] = None,
index: Optional[PostgresIndexConfig] = None,
) -> None:
if isinstance(conn, AsyncConnectionPool) and pipe is not None:
raise ValueError(
@@ -57,6 +67,12 @@ class AsyncPostgresStore(AsyncBatchedBaseStore, BasePostgresStore[_ainternal.Con
self.lock = asyncio.Lock()
self.loop = asyncio.get_running_loop()
self.supports_pipeline = Capabilities().has_pipeline()
self.index_config = index
if self.index_config:
self.embeddings, self.index_config = _ensure_index_config(self.index_config)
else:
self.embeddings = None
async def abatch(self, ops: Iterable[Op]) -> list[Result]:
grouped_ops, num_ops = _group_ops(ops)
@@ -71,13 +87,117 @@ class AsyncPostgresStore(AsyncBatchedBaseStore, BasePostgresStore[_ainternal.Con
return results
def batch(self, ops: Iterable[Op]) -> list[Result]:
return asyncio.run_coroutine_threadsafe(self.abatch(ops), self.loop).result()
@classmethod
@asynccontextmanager
async def from_conn_string(
cls,
conn_string: str,
*,
pipeline: bool = False,
pool_config: Optional[PoolConfig] = None,
index: Optional[PostgresIndexConfig] = None,
) -> AsyncIterator["AsyncPostgresStore"]:
"""Create a new AsyncPostgresStore instance from a connection string.
Args:
conn_string (str): The Postgres connection info string.
pipeline (bool): Whether to use AsyncPipeline (only for single connections)
pool_config (Optional[PoolConfig]): Configuration for the connection pool.
If provided, will create a connection pool and use it instead of a single connection.
This overrides the `pipeline` argument.
index (Optional[PostgresIndexConfig]): The embedding config.
Returns:
AsyncPostgresStore: A new AsyncPostgresStore instance.
"""
if pool_config is not None:
pc = pool_config.copy()
async with cast(
AsyncConnectionPool[AsyncConnection[DictRow]],
AsyncConnectionPool(
conn_string,
min_size=pc.pop("min_size", 1),
max_size=pc.pop("max_size", None),
kwargs={
"autocommit": True,
"prepare_threshold": 0,
"row_factory": dict_row,
**(pc.pop("kwargs", None) or {}),
},
**cast(dict, pc),
),
) as pool:
yield cls(conn=pool, index=index)
else:
async with await AsyncConnection.connect(
conn_string, autocommit=True, prepare_threshold=0, row_factory=dict_row
) as conn:
if pipeline:
async with conn.pipeline() as pipe:
yield cls(conn=conn, pipe=pipe, index=index)
else:
yield cls(conn=conn, index=index)
async def setup(self) -> None:
"""Set up the store database asynchronously.
This method creates the necessary tables in the Postgres database if they don't
already exist and runs database migrations. It MUST be called directly by the user
the first time the store is used.
"""
async def _get_version(cur: AsyncCursor[DictRow], table: str) -> int:
try:
await cur.execute(f"SELECT v FROM {table} ORDER BY v DESC LIMIT 1")
row = await cur.fetchone()
if row is None:
version = -1
else:
version = row["v"]
except UndefinedTable:
version = -1
await cur.execute(
f"""
CREATE TABLE IF NOT EXISTS {table} (
v INTEGER PRIMARY KEY
)
"""
)
return version
async with self._cursor() as cur:
version = await _get_version(cur, table="store_migrations")
for v, sql in enumerate(self.MIGRATIONS[version + 1 :], start=version + 1):
await cur.execute(sql)
await cur.execute("INSERT INTO store_migrations (v) VALUES (%s)", (v,))
if self.index_config:
version = await _get_version(cur, table="vector_migrations")
for v, migration in enumerate(
self.VECTOR_MIGRATIONS[version + 1 :], start=version + 1
):
sql = migration.sql
if migration.params:
params = {
k: v(self) if v is not None and callable(v) else v
for k, v in migration.params.items()
}
sql = sql % params
await cur.execute(sql)
await cur.execute(
"INSERT INTO vector_migrations (v) VALUES (%s)", (v,)
)
async def _execute_batch(
self,
grouped_ops: dict,
results: list[Result],
conn: AsyncConnection[DictRow],
) -> None:
async with self._cursor(conn, pipeline=True) as cur:
async with self._cursor(pipeline=True) as cur:
if GetOp in grouped_ops:
await self._batch_get_ops(
cast(Sequence[tuple[int, GetOp]], grouped_ops[GetOp]),
@@ -132,7 +252,31 @@ class AsyncPostgresStore(AsyncBatchedBaseStore, BasePostgresStore[_ainternal.Con
put_ops: Sequence[tuple[int, PutOp]],
cur: AsyncCursor[DictRow],
) -> None:
queries = self._get_batch_PUT_queries(put_ops)
queries, embedding_request = self._prepare_batch_PUT_queries(put_ops)
if embedding_request:
if self.embeddings is None:
# Should not get here since the embedding config is required
# to return an embedding_request above
raise ValueError(
"Embedding configuration is required for vector operations "
f"(for semantic search). "
f"Please provide an EmbeddingConfig when initializing the {self.__class__.__name__}."
)
query, txt_params = embedding_request
vectors = await self.embeddings.aembed_documents(
[param[-1] for param in txt_params]
)
queries.append(
(
query,
[
p
for (ns, k, pathname, _), vector in zip(txt_params, vectors)
for p in (ns, k, pathname, vector)
],
)
)
for query, params in queries:
await cur.execute(query, params)
@@ -142,8 +286,19 @@ class AsyncPostgresStore(AsyncBatchedBaseStore, BasePostgresStore[_ainternal.Con
results: list[Result],
cur: AsyncCursor[DictRow],
) -> None:
queries = self._get_batch_search_queries(search_ops)
for (query, params), (idx, _) in zip(queries, search_ops):
queries, embedding_requests = self._prepare_batch_search_queries(search_ops)
if embedding_requests and self.embeddings:
vectors = await self.embeddings.aembed_documents(
[query for _, query in embedding_requests]
)
for (idx, _), vector in zip(embedding_requests, vectors):
_paramslist = queries[idx][1]
for i in range(len(_paramslist)):
if _paramslist[i] is _PLACEHOLDER:
_paramslist[i] = vector
for (idx, _), (query, params) in zip(search_ops, queries):
await cur.execute(query, params)
rows = cast(list[Row], await cur.fetchall())
items = [
@@ -169,129 +324,46 @@ class AsyncPostgresStore(AsyncBatchedBaseStore, BasePostgresStore[_ainternal.Con
@asynccontextmanager
async def _cursor(
self, conn: AsyncConnection[DictRow], *, pipeline: bool = False
) -> AsyncIterator[AsyncCursor[Any]]:
self, *, pipeline: bool = False
) -> AsyncIterator[AsyncCursor[DictRow]]:
"""Create a database cursor as a context manager.
Args:
conn: The database connection to use
pipeline: whether to use pipeline for the DB operations inside the context manager.
Will be applied regardless of whether the PostgresStore instance was initialized with a pipeline.
If pipeline mode is not supported, will fall back to using transaction context manager.
"""
if self.pipe:
# a connection in pipeline mode can be used concurrently
# in multiple threads/coroutines, but only one cursor can be
# used at a time
async with conn.cursor(binary=True) as cur:
async with _ainternal.get_connection(self.conn) as conn:
if self.pipe:
# a connection in pipeline mode can be used concurrently
# in multiple threads/coroutines, but only one cursor can be
# used at a time
try:
yield cur
async with conn.cursor(binary=True, row_factory=dict_row) as cur:
yield cur
finally:
if pipeline:
await self.pipe.sync()
elif pipeline:
# a connection not in pipeline mode can only be used by one
# thread/coroutine at a time, so we acquire a lock
if self.supports_pipeline:
async with self.lock, conn.pipeline(), conn.cursor(binary=True) as cur:
yield cur
elif pipeline:
# a connection not in pipeline mode can only be used by one
# thread/coroutine at a time, so we acquire a lock
if self.supports_pipeline:
async with (
self.lock,
conn.pipeline(),
conn.cursor(binary=True, row_factory=dict_row) as cur,
):
yield cur
else:
async with (
self.lock,
conn.transaction(),
conn.cursor(binary=True, row_factory=dict_row) as cur,
):
yield cur
else:
async with (
self.lock,
conn.transaction(),
conn.cursor(binary=True) as cur,
):
yield cur
else:
async with conn.cursor(binary=True) as cur:
yield cur
def batch(self, ops: Iterable[Op]) -> list[Result]:
return asyncio.run_coroutine_threadsafe(self.abatch(ops), self.loop).result()
@classmethod
@asynccontextmanager
async def from_conn_string(
cls,
conn_string: str,
*,
pipeline: bool = False,
pool_config: Optional[PoolConfig] = None,
) -> AsyncIterator["AsyncPostgresStore"]:
"""Create a new AsyncPostgresStore instance from a connection string.
Args:
conn_string (str): The Postgres connection info string.
pipeline (bool): Whether to use AsyncPipeline (only for single connections)
pool_config (Optional[PoolConfig]): Configuration for the connection pool.
If provided, will create a connection pool and use it instead of a single connection.
This overrides the `pipeline` argument.
Returns:
AsyncPostgresStore: A new AsyncPostgresStore instance.
"""
if pool_config is not None:
pc = pool_config.copy()
async with cast(
AsyncConnectionPool[AsyncConnection[DictRow]],
AsyncConnectionPool(
conn_string,
min_size=pc.pop("min_size", 1),
max_size=pc.pop("max_size", None),
kwargs={
"autocommit": True,
"prepare_threshold": 0,
"row_factory": dict_row,
**(pc.pop("kwargs", None) or {}),
},
**cast(dict, pc),
),
) as pool:
yield cls(conn=pool)
else:
async with await AsyncConnection.connect(
conn_string, autocommit=True, prepare_threshold=0, row_factory=dict_row
) as conn:
if pipeline:
async with conn.pipeline() as pipe:
yield cls(conn=conn, pipe=pipe)
else:
yield cls(conn=conn)
async def setup(self) -> None:
"""Set up the store database asynchronously.
This method creates the necessary tables in the Postgres database if they don't
already exist and runs database migrations. It MUST be called directly by the user
the first time the store is used.
"""
async with _ainternal.get_connection(self.conn) as conn:
async with conn.cursor() as cur:
try:
await cur.execute(
"SELECT v FROM store_migrations ORDER BY v DESC LIMIT 1"
)
row = cast(dict, await cur.fetchone())
if row is None:
version = -1
else:
version = row["v"]
except UndefinedTable:
version = -1
# Create store_migrations table if it doesn't exist
await cur.execute(
"""
CREATE TABLE IF NOT EXISTS store_migrations (
v INTEGER PRIMARY KEY
)
"""
)
for v, migration in enumerate(
self.MIGRATIONS[version + 1 :], start=version + 1
):
await cur.execute(migration)
await cur.execute(
"INSERT INTO store_migrations (v) VALUES (%s)", (v,)
)
if self.pipe:
await self.pipe.sync()
@@ -3,16 +3,17 @@ import json
import logging
import threading
from collections import defaultdict
from collections.abc import Iterable, Iterator, Sequence
from contextlib import contextmanager
from datetime import datetime
from typing import (
TYPE_CHECKING,
Any,
Callable,
Generic,
Iterable,
Iterator,
Literal,
NamedTuple,
Optional,
Sequence,
TypeVar,
Union,
cast,
@@ -31,6 +32,7 @@ from langgraph.checkpoint.postgres import _internal as _pg_internal
from langgraph.store.base import (
BaseStore,
GetOp,
IndexConfig,
Item,
ListNamespacesOp,
Op,
@@ -38,12 +40,25 @@ from langgraph.store.base import (
Result,
SearchItem,
SearchOp,
ensure_embeddings,
get_text_at_path,
tokenize_path,
)
if TYPE_CHECKING:
from langchain_core.embeddings import Embeddings
logger = logging.getLogger(__name__)
MIGRATIONS = [
class Migration(NamedTuple):
"""A database migration with optional conditions and parameters."""
sql: str
params: Optional[dict[str, Any]] = None
MIGRATIONS: Sequence[str] = [
"""
CREATE TABLE IF NOT EXISTS store (
-- 'prefix' represents the doc's 'namespace'
@@ -61,6 +76,39 @@ CREATE INDEX IF NOT EXISTS store_prefix_idx ON store USING btree (prefix text_pa
""",
]
VECTOR_MIGRATIONS: Sequence[Migration] = [
Migration(
"""
CREATE EXTENSION IF NOT EXISTS vector;
""",
),
Migration(
"""
CREATE TABLE IF NOT EXISTS store_vectors (
prefix text NOT NULL,
key text NOT NULL,
field_name text NOT NULL,
embedding %(vector_type)s(%(dims)s),
created_at TIMESTAMP WITH TIME ZONE DEFAULT CURRENT_TIMESTAMP,
updated_at TIMESTAMP WITH TIME ZONE DEFAULT CURRENT_TIMESTAMP,
PRIMARY KEY (prefix, key, field_name),
FOREIGN KEY (prefix, key) REFERENCES store(prefix, key) ON DELETE CASCADE
);
""",
params={
"dims": lambda store: store.index_config["dims"],
"vector_type": lambda store: (
cast(PostgresIndexConfig, store.index_config)
.get("ann_index_config", {})
.get("vector_type", "vector")
),
},
),
# TODO: Add an HNSW or IVFFlat index depending on config
# First must improve the search query when filtering by
# namespace
]
C = TypeVar("C", bound=Union[_pg_internal.Conn, _ainternal.Conn])
@@ -89,10 +137,39 @@ class PoolConfig(TypedDict, total=False):
"""
class ANNIndexConfig(TypedDict, total=False):
"""Configuration for vector index in PostgreSQL store."""
vector_type: Literal["vector", "halfvec"]
"""Type of vector storage to use.
Options:
- 'vector': Regular vectors (default)
- 'halfvec': Half-precision vectors for reduced memory usage
"""
class PostgresIndexConfig(IndexConfig, total=False):
"""Configuration for vector embeddings in PostgreSQL store with pgvector-specific options.
Extends EmbeddingConfig with additional configuration for pgvector index and vector types.
"""
ann_index_config: ANNIndexConfig
"""Specific configuration for the chosen index type (HNSW or IVF Flat)."""
distance_type: Literal["l2", "inner_product", "cosine"]
"""Distance metric to use for vector similarity search:
- 'l2': Euclidean distance
- 'inner_product': Dot product
- 'cosine': Cosine similarity
"""
class BasePostgresStore(Generic[C]):
MIGRATIONS = MIGRATIONS
VECTOR_MIGRATIONS = VECTOR_MIGRATIONS
conn: C
_deserializer: Optional[Callable[[Union[bytes, orjson.Fragment]], dict[str, Any]]]
index_config: Optional[PostgresIndexConfig]
def _get_batch_GET_ops_queries(
self,
@@ -114,10 +191,13 @@ class BasePostgresStore(Generic[C]):
results.append((query, params, namespace, items))
return results
def _get_batch_PUT_queries(
def _prepare_batch_PUT_queries(
self,
put_ops: Sequence[tuple[int, PutOp]],
) -> list[tuple[str, Sequence]]:
) -> tuple[
list[tuple[str, Sequence]],
Optional[tuple[str, Sequence[tuple[str, str, str, str]]]],
]:
# Last-write wins
dedupped_ops: dict[tuple[tuple[str, ...], str], PutOp] = {}
for _, op in put_ops:
@@ -144,60 +224,182 @@ class BasePostgresStore(Generic[C]):
)
params = (_namespace_to_text(namespace), *keys)
queries.append((query, params))
embedding_request: Optional[tuple[str, Sequence[tuple[str, str, str, str]]]] = (
None
)
if inserts:
values = []
insertion_params = []
vector_values = []
embedding_request_params = []
# First handle main store insertions
for op in inserts:
values.append("(%s, %s, %s, CURRENT_TIMESTAMP, CURRENT_TIMESTAMP)")
insertion_params.extend(
[
_namespace_to_text(op.namespace),
op.key,
Jsonb(op.value),
Jsonb(cast(dict, op.value)),
]
)
# Then handle embeddings if configured
if self.index_config:
for op in inserts:
if op.index is False:
continue
value = op.value
ns = _namespace_to_text(op.namespace)
k = op.key
if op.index is None:
paths = self.index_config["__tokenized_fields"]
else:
paths = [(ix, tokenize_path(ix)) for ix in op.index]
for path, tokenized_path in paths:
texts = get_text_at_path(value, tokenized_path)
for i, text in enumerate(texts):
pathname = f"{path}.{i}" if len(texts) > 1 else path
vector_values.append(
"(%s, %s, %s, %s, CURRENT_TIMESTAMP, CURRENT_TIMESTAMP)"
)
embedding_request_params.append((ns, k, pathname, text))
values_str = ",".join(values)
query = f"""
INSERT INTO store (prefix, key, value, created_at, updated_at)
VALUES {values_str}
ON CONFLICT (prefix, key) DO UPDATE
SET value = EXCLUDED.value, updated_at = CURRENT_TIMESTAMP
SET value = EXCLUDED.value,
updated_at = CURRENT_TIMESTAMP
"""
queries.append((query, insertion_params))
return queries
if vector_values:
values_str = ",".join(vector_values)
query = f"""
INSERT INTO store_vectors (prefix, key, field_name, embedding, created_at, updated_at)
VALUES {values_str}
ON CONFLICT (prefix, key, field_name) DO UPDATE
SET embedding = EXCLUDED.embedding,
updated_at = CURRENT_TIMESTAMP
"""
embedding_request = (query, embedding_request_params)
def _get_batch_search_queries(
return queries, embedding_request
def _prepare_batch_search_queries(
self,
search_ops: Sequence[tuple[int, SearchOp]],
) -> list[tuple[str, Sequence]]:
queries: list[tuple[str, Sequence]] = []
for _, op in search_ops:
query = """
SELECT prefix, key, value, created_at, updated_at
FROM store
WHERE prefix LIKE %s
"""
params: list = [f"{_namespace_to_text(op.namespace_prefix)}%"]
) -> tuple[
list[tuple[str, list[Union[None, str, list[float]]]]], # queries, params
list[tuple[int, str]], # idx, query_text pairs to embed
]:
queries = []
embedding_requests = []
for idx, (_, op) in enumerate(search_ops):
# Build filter conditions first
filter_params = []
filter_conditions = []
if op.filter:
filter_conditions = []
for key, value in op.filter.items():
if isinstance(value, list):
filter_conditions.append("value->%s @> %s::jsonb")
params.extend([key, json.dumps(value)])
if isinstance(value, dict):
for op_name, val in value.items():
condition, filter_params_ = self._get_filter_condition(
key, op_name, val
)
filter_conditions.append(condition)
filter_params.extend(filter_params_)
else:
filter_conditions.append("value->%s = %s::jsonb")
params.extend([key, json.dumps(value)])
query += " AND " + " AND ".join(filter_conditions)
filter_params.extend([key, json.dumps(value)])
# Note: we will need to not do this if sim/keyword search
# is used
query += " ORDER BY updated_at DESC LIMIT %s OFFSET %s"
params.extend([op.limit, op.offset])
# Vector search branch
if op.query and self.index_config:
embedding_requests.append((idx, op.query))
queries.append((query, params))
return queries
score_operator = _get_distance_operator(self)
vector_type = (
cast(PostgresIndexConfig, self.index_config)
.get("ann_index_config", {})
.get("vector_type", "vector")
)
if (
vector_type == "bit"
and self.index_config.get("distance_type") == "hamming"
):
score_operator = score_operator % (
"%s",
self.index_config["dims"],
)
else:
score_operator = score_operator % (
"%s",
vector_type,
)
vectors_per_doc_estimate = self.index_config["__estimated_num_vectors"]
expanded_limit = (op.limit * vectors_per_doc_estimate * 2) + 1
# Vector search with CTE for proper score handling
filter_str = (
""
if not filter_conditions
else " AND " + " AND ".join(filter_conditions)
)
base_query = f"""
WITH scored AS (
SELECT s.prefix, s.key, s.value, s.created_at, s.updated_at, {score_operator} AS score
FROM store s
JOIN store_vectors sv ON s.prefix = sv.prefix AND s.key = sv.key
WHERE s.prefix LIKE %s {filter_str}
ORDER BY {score_operator} DESC
LIMIT %s
)
SELECT * FROM (
SELECT DISTINCT ON (prefix, key)
prefix, key, value, created_at, updated_at, score
FROM scored
ORDER BY prefix, key, score DESC
) AS unique_docs
ORDER BY score DESC
LIMIT %s
OFFSET %s
"""
params = [
_PLACEHOLDER, # Vector placeholder
f"{_namespace_to_text(op.namespace_prefix)}%",
*filter_params,
_PLACEHOLDER,
expanded_limit,
op.limit,
op.offset,
]
# Regular search branch
else:
base_query = """
SELECT prefix, key, value, created_at, updated_at
FROM store
WHERE prefix LIKE %s
"""
params = [f"{_namespace_to_text(op.namespace_prefix)}%"]
if filter_conditions:
params.extend(filter_params)
base_query += " AND " + " AND ".join(filter_conditions)
base_query += " ORDER BY updated_at DESC"
base_query += " LIMIT %s OFFSET %s"
params.extend([op.limit, op.offset])
queries.append((base_query, params))
return queries, embedding_requests
def _get_batch_list_namespaces_queries(
self,
@@ -249,13 +451,37 @@ class BasePostgresStore(Generic[C]):
query += " ORDER BY truncated_prefix LIMIT %s OFFSET %s"
params.extend([op.limit, op.offset])
queries.append((query, params))
queries.append((query, tuple(params)))
return queries
def _get_filter_condition(self, key: str, op: str, value: Any) -> tuple[str, list]:
"""Helper to generate filter conditions."""
if op == "$eq":
return "value->%s = %s::jsonb", [key, json.dumps(value)]
elif op == "$gt":
return "value->>%s > %s", [key, str(value)]
elif op == "$gte":
return "value->>%s >= %s", [key, str(value)]
elif op == "$lt":
return "value->>%s < %s", [key, str(value)]
elif op == "$lte":
return "value->>%s <= %s", [key, str(value)]
elif op == "$ne":
return "value->%s != %s::jsonb", [key, json.dumps(value)]
else:
raise ValueError(f"Unsupported operator: {op}")
class PostgresStore(BaseStore, BasePostgresStore[_pg_internal.Conn]):
__slots__ = ("_deserializer", "pipe", "lock", "supports_pipeline")
__slots__ = (
"_deserializer",
"pipe",
"lock",
"supports_pipeline",
"index_config",
"embeddings",
)
def __init__(
self,
@@ -265,6 +491,7 @@ class PostgresStore(BaseStore, BasePostgresStore[_pg_internal.Conn]):
deserializer: Optional[
Callable[[Union[bytes, orjson.Fragment]], dict[str, Any]]
] = None,
index: Optional[PostgresIndexConfig] = None,
) -> None:
super().__init__()
self._deserializer = deserializer
@@ -272,6 +499,11 @@ class PostgresStore(BaseStore, BasePostgresStore[_pg_internal.Conn]):
self.pipe = pipe
self.supports_pipeline = Capabilities().has_pipeline()
self.lock = threading.Lock()
self.index_config = index
if self.index_config:
self.embeddings, self.index_config = _ensure_index_config(self.index_config)
else:
self.embeddings = None
@classmethod
@contextmanager
@@ -281,15 +513,18 @@ class PostgresStore(BaseStore, BasePostgresStore[_pg_internal.Conn]):
*,
pipeline: bool = False,
pool_config: Optional[PoolConfig] = None,
index: Optional[PostgresIndexConfig] = None,
) -> Iterator["PostgresStore"]:
"""Create a new PostgresStore instance from a connection string.
Args:
conn_string (str): The Postgres connection info string.
pipeline (bool): whether to use Pipeline (only for single connections)
pipeline (bool): whether to use Pipeline
pool_config (Optional[PoolArgs]): Configuration for the connection pool.
If provided, will create a connection pool and use it instead of a single connection.
This overrides the `pipeline` argument.
index (Optional[PostgresIndexConfig]): The index configuration for the store.
Returns:
PostgresStore: A new PostgresStore instance.
"""
@@ -310,16 +545,16 @@ class PostgresStore(BaseStore, BasePostgresStore[_pg_internal.Conn]):
**cast(dict, pc),
),
) as pool:
yield cls(conn=pool)
yield cls(conn=pool, index=index)
else:
with Connection.connect(
conn_string, autocommit=True, prepare_threshold=0, row_factory=dict_row
) as conn:
if pipeline:
with conn.pipeline() as pipe:
yield cls(conn, pipe=pipe)
yield cls(conn, pipe=pipe, index=index)
else:
yield cls(conn)
yield cls(conn, index=index)
@contextmanager
def _cursor(self, *, pipeline: bool = False) -> Iterator[Cursor[DictRow]]:
@@ -419,7 +654,32 @@ class PostgresStore(BaseStore, BasePostgresStore[_pg_internal.Conn]):
put_ops: Sequence[tuple[int, PutOp]],
cur: Cursor[DictRow],
) -> None:
queries = self._get_batch_PUT_queries(put_ops)
queries, embedding_request = self._prepare_batch_PUT_queries(put_ops)
if embedding_request:
if self.embeddings is None:
# Should not get here since the embedding config is required
# to return an embedding_request above
raise ValueError(
"Embedding configuration is required for vector operations "
f"(for semantic search). "
f"Please provide an Embeddings when initializing the {self.__class__.__name__}."
)
query, txt_params = embedding_request
# Update the params to replace the raw text with the vectors
vectors = self.embeddings.embed_documents(
[param[-1] for param in txt_params]
)
queries.append(
(
query,
[
p
for (ns, k, pathname, _), vector in zip(txt_params, vectors)
for p in (ns, k, pathname, vector)
],
)
)
for query, params in queries:
cur.execute(query, params)
@@ -429,9 +689,20 @@ class PostgresStore(BaseStore, BasePostgresStore[_pg_internal.Conn]):
results: list[Result],
cur: Cursor[DictRow],
) -> None:
for (query, params), (idx, _) in zip(
self._get_batch_search_queries(search_ops), search_ops
):
queries, embedding_requests = self._prepare_batch_search_queries(search_ops)
if embedding_requests and self.embeddings:
embeddings = self.embeddings.embed_documents(
[query for _, query in embedding_requests]
)
for (idx, _), embedding in zip(embedding_requests, embeddings):
_paramslist = queries[idx][1]
for i in range(len(_paramslist)):
if _paramslist[i] is _PLACEHOLDER:
_paramslist[i] = embedding
for (idx, _), (query, params) in zip(search_ops, queries):
# Execute the actual query
cur.execute(query, params)
rows = cast(list[Row], cur.fetchall())
results[idx] = [
@@ -463,9 +734,10 @@ class PostgresStore(BaseStore, BasePostgresStore[_pg_internal.Conn]):
already exist and runs database migrations. It MUST be called directly by the user
the first time the store is used.
"""
with self._cursor() as cur:
def _get_version(cur: Cursor[dict[str, Any]], table: str) -> int:
try:
cur.execute("SELECT v FROM store_migrations ORDER BY v DESC LIMIT 1")
cur.execute(f"SELECT v FROM {table} ORDER BY v DESC LIMIT 1")
row = cast(dict, cur.fetchone())
if row is None:
version = -1
@@ -474,18 +746,35 @@ class PostgresStore(BaseStore, BasePostgresStore[_pg_internal.Conn]):
except UndefinedTable:
version = -1
cur.execute(
"""
CREATE TABLE IF NOT EXISTS store_migrations (
f"""
CREATE TABLE IF NOT EXISTS {table} (
v INTEGER PRIMARY KEY
)
"""
)
for v, migration in enumerate(
self.MIGRATIONS[version + 1 :], start=version + 1
):
cur.execute(migration)
return version
with self._cursor() as cur:
version = _get_version(cur, table="store_migrations")
for v, sql in enumerate(self.MIGRATIONS[version + 1 :], start=version + 1):
cur.execute(sql)
cur.execute("INSERT INTO store_migrations (v) VALUES (%s)", (v,))
if self.index_config:
version = _get_version(cur, table="vector_migrations")
for v, migration in enumerate(
self.VECTOR_MIGRATIONS[version + 1 :], start=version + 1
):
sql = migration.sql
if migration.params:
params = {
k: v(self) if v is not None and callable(v) else v
for k, v in migration.params.items()
}
sql = sql % params
cur.execute(sql)
cur.execute("INSERT INTO vector_migrations (v) VALUES (%s)", (v,))
class Row(TypedDict):
key: str
@@ -495,6 +784,45 @@ class Row(TypedDict):
updated_at: datetime
# Private utilities
_DEFAULT_ANN_CONFIG = ANNIndexConfig(
vector_type="vector",
)
def _get_vector_type_ops(store: BasePostgresStore) -> str:
"""Get the vector type operator class based on config."""
if not store.index_config:
return "vector_cosine_ops"
config = cast(PostgresIndexConfig, store.index_config)
index_config = config.get("ann_index_config", _DEFAULT_ANN_CONFIG).copy()
vector_type = cast(str, index_config.get("vector_type", "vector"))
if vector_type not in ("vector", "halfvec"):
raise ValueError(
f"Vector type must be 'vector' or 'halfvec', got {vector_type}"
)
distance_type = config.get("distance_type", "cosine")
# For regular vectors
type_prefix = {"vector": "vector", "halfvec": "halfvec"}[vector_type]
if distance_type not in ("l2", "inner_product", "cosine"):
raise ValueError(
f"Vector type {vector_type} only supports 'l2', 'inner_product', or 'cosine' distance, got {distance_type}"
)
distance_suffix = {
"l2": "l2_ops",
"inner_product": "ip_ops",
"cosine": "cosine_ops",
}[distance_type]
return f"{type_prefix}_{distance_suffix}"
def _namespace_to_text(
namespace: tuple[str, ...], handle_wildcards: bool = False
) -> str:
@@ -510,16 +838,26 @@ def _row_to_item(
*,
loader: Optional[Callable[[Union[bytes, orjson.Fragment]], dict[str, Any]]] = None,
) -> Item:
"""Convert a row from the database into an Item."""
loader = loader or _json_loads
"""Convert a row from the database into an Item.
Args:
namespace: Item namespace
row: Database row
loader: Optional value loader for non-dict values
"""
val = row["value"]
return Item(
value=val if isinstance(val, dict) else loader(val),
key=row["key"],
namespace=namespace,
created_at=row["created_at"],
updated_at=row["updated_at"],
)
if not isinstance(val, dict):
val = (loader or _json_loads)(val)
kwargs = {
"key": row["key"],
"namespace": namespace,
"value": val,
"created_at": row["created_at"],
"updated_at": row["updated_at"],
}
return Item(**kwargs)
def _row_to_search_item(
@@ -575,3 +913,62 @@ def _decode_ns_bytes(namespace: Union[str, bytes, list]) -> tuple[str, ...]:
if isinstance(namespace, bytes):
namespace = namespace.decode()[1:]
return tuple(namespace.split("."))
def _get_distance_operator(store: Any) -> str:
"""Get the distance operator and score expression based on config."""
# Note: Today, we are not using ANN indices due to restrictions
# on PGVector's support for mixing vector and non-vector filters
# To use the index, PGVector expects:
# - ORDER BY the operator NOT an expression (even negation blocks it)
# - ASCENDING order
# - Any WHERE clause should be over a partial index.
# If we violate any of these, it will use a sequential scan
# See https://github.com/pgvector/pgvector/issues/216 and the
# pgvector documentation for more details.
if not store.index_config:
raise ValueError(
"Embedding configuration is required for vector operations "
f"(for semantic search). "
f"Please provide an Embeddings when initializing the {store.__class__.__name__}."
)
config = cast(PostgresIndexConfig, store.index_config)
distance_type = config.get("distance_type", "cosine")
if distance_type == "l2":
return "1 - (sv.embedding <-> %s::%s)"
elif distance_type == "inner_product":
return "-(sv.embedding <#> %s::%s)"
else: # cosine
return "1 - (sv.embedding <=> %s::%s)"
def _ensure_index_config(
index_config: PostgresIndexConfig,
) -> tuple[Optional["Embeddings"], PostgresIndexConfig]:
index_config = index_config.copy()
tokenized: list[tuple[str, Union[Literal["$"], list[str]]]] = []
tot = 0
text_fields = index_config.get("text_fields") or ["$"]
if isinstance(text_fields, str):
text_fields = [text_fields]
if not isinstance(text_fields, list):
raise ValueError(f"Text fields must be a list or a string. Got {text_fields}")
for p in text_fields:
if p == "$":
tokenized.append((p, "$"))
tot += 1
else:
toks = tokenize_path(p)
tokenized.append((p, toks))
tot += len(toks)
index_config["__tokenized_fields"] = tokenized
index_config["__estimated_num_vectors"] = tot
embeddings = ensure_embeddings(
index_config.get("embed"),
)
return embeddings, index_config
_PLACEHOLDER = object()