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* fix(skills): move version into metadata and normalize to semver 29 skills declared `version` at the top level of their frontmatter. The schema reads it from `metadata`, so tooling that follows the schema either misses it or has to special-case the top level. Three motion skills also declared `version: 1.0`, which is not a valid semantic version; normalized to `1.0.0`. No behavioral change — frontmatter metadata only. * fix(skills): state activation triggers in skill descriptions 148 skills described what they cover but never named the situation that should trigger them. Since the description is what Claude matches against to decide whether to load a skill, a description without a trigger makes activation guesswork — the skill is either missed or loaded at the wrong time. Added a "Use when ..." clause to each, derived from the skill's own body (most already stated the trigger under "## When to Use" or in the opening line; that intent is now reflected in the frontmatter where it is actually read from). Descriptions were only appended to; no existing wording was removed. * fix(skills): sync activation triggers into the Codex skill mirror 10 of the skills whose descriptions changed are also mirrored under `.agents/skills/`, where the description was previously a verbatim copy. Left alone, the two surfaces would disagree about when the skill applies. Only the description line is synced; the Codex copies keep their reduced frontmatter, since that validator accepts only name, description, metadata, license, and allowed-tools. * fix(skills): correct three activation clauses from review - autonomous-loops: the clause pulled new loop work into a skill that its own body marks as a compatibility shim retained for one release. It now points at the canonical continuous-agent-loop instead. - continuous-learning: the description carried the v1 routing directive twice; collapsed to one. - homelab-pihole-dns: the clause fired on any broken home DNS. Narrowed to tasks that actually involve Pi-hole. * chore: retain current main lockfile --------- Co-authored-by: Çağrı Solakoğlu <cagri.solakoglu@vtcenerji.com> Co-authored-by: haelyra <49814733+haelyra@users.noreply.github.com>
398 lines
12 KiB
Markdown
398 lines
12 KiB
Markdown
---
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name: pytorch-patterns
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description: PyTorch deep learning patterns and best practices for building robust, efficient, and reproducible training pipelines, model architectures, and data loading. Use when writing or reviewing PyTorch training loops, model architectures, or data loading, or when a run will not reproduce.
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metadata:
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origin: ECC
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---
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# PyTorch Development Patterns
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Idiomatic PyTorch patterns and best practices for building robust, efficient, and reproducible deep learning applications.
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## When to Activate
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- Writing new PyTorch models or training scripts
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- Reviewing deep learning code
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- Debugging training loops or data pipelines
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- Optimizing GPU memory usage or training speed
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- Setting up reproducible experiments
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## Core Principles
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### 1. Device-Agnostic Code
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Always write code that works on both CPU and GPU without hardcoding devices.
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```python
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# Good: Device-agnostic
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device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
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model = MyModel().to(device)
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data = data.to(device)
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# Bad: Hardcoded device
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model = MyModel().cuda() # Crashes if no GPU
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data = data.cuda()
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```
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### 2. Reproducibility First
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Set all random seeds for reproducible results.
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```python
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# Good: Full reproducibility setup
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def set_seed(seed: int = 42) -> None:
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torch.manual_seed(seed)
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torch.cuda.manual_seed_all(seed)
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np.random.seed(seed)
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random.seed(seed)
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torch.backends.cudnn.deterministic = True
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torch.backends.cudnn.benchmark = False
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# Bad: No seed control
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model = MyModel() # Different weights every run
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```
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### 3. Explicit Shape Management
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Always document and verify tensor shapes.
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```python
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# Good: Shape-annotated forward pass
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def forward(self, x: torch.Tensor) -> torch.Tensor:
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# x: (batch_size, channels, height, width)
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x = self.conv1(x) # -> (batch_size, 32, H, W)
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x = self.pool(x) # -> (batch_size, 32, H//2, W//2)
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x = x.view(x.size(0), -1) # -> (batch_size, 32*H//2*W//2)
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return self.fc(x) # -> (batch_size, num_classes)
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# Bad: No shape tracking
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def forward(self, x):
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x = self.conv1(x)
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x = self.pool(x)
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x = x.view(x.size(0), -1) # What size is this?
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return self.fc(x) # Will this even work?
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```
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## Model Architecture Patterns
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### Clean nn.Module Structure
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```python
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# Good: Well-organized module
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class ImageClassifier(nn.Module):
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def __init__(self, num_classes: int, dropout: float = 0.5) -> None:
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super().__init__()
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self.features = nn.Sequential(
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nn.Conv2d(3, 64, kernel_size=3, padding=1),
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nn.BatchNorm2d(64),
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nn.ReLU(inplace=True),
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nn.MaxPool2d(2),
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)
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self.classifier = nn.Sequential(
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nn.Dropout(dropout),
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nn.Linear(64 * 16 * 16, num_classes),
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)
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def forward(self, x: torch.Tensor) -> torch.Tensor:
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x = self.features(x)
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x = x.view(x.size(0), -1)
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return self.classifier(x)
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# Bad: Everything in forward
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class ImageClassifier(nn.Module):
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def __init__(self):
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super().__init__()
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def forward(self, x):
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x = F.conv2d(x, weight=self.make_weight()) # Creates weight each call!
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return x
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```
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### Proper Weight Initialization
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```python
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# Good: Explicit initialization
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def _init_weights(self, module: nn.Module) -> None:
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if isinstance(module, nn.Linear):
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nn.init.kaiming_normal_(module.weight, mode="fan_out", nonlinearity="relu")
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if module.bias is not None:
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nn.init.zeros_(module.bias)
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elif isinstance(module, nn.Conv2d):
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nn.init.kaiming_normal_(module.weight, mode="fan_out", nonlinearity="relu")
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elif isinstance(module, nn.BatchNorm2d):
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nn.init.ones_(module.weight)
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nn.init.zeros_(module.bias)
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model = MyModel()
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model.apply(model._init_weights)
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```
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## Training Loop Patterns
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### Standard Training Loop
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```python
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# Good: Complete training loop with best practices
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def train_one_epoch(
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model: nn.Module,
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dataloader: DataLoader,
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optimizer: torch.optim.Optimizer,
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criterion: nn.Module,
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device: torch.device,
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scaler: torch.amp.GradScaler | None = None,
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) -> float:
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model.train() # Always set train mode
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total_loss = 0.0
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for batch_idx, (data, target) in enumerate(dataloader):
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data, target = data.to(device), target.to(device)
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optimizer.zero_grad(set_to_none=True) # More efficient than zero_grad()
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# Mixed precision training
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with torch.amp.autocast("cuda", enabled=scaler is not None):
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output = model(data)
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loss = criterion(output, target)
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if scaler is not None:
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scaler.scale(loss).backward()
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scaler.unscale_(optimizer)
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torch.nn.utils.clip_grad_norm_(model.parameters(), max_norm=1.0)
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scaler.step(optimizer)
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scaler.update()
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else:
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loss.backward()
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torch.nn.utils.clip_grad_norm_(model.parameters(), max_norm=1.0)
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optimizer.step()
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total_loss += loss.item()
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return total_loss / len(dataloader)
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```
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### Validation Loop
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```python
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# Good: Proper evaluation
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@torch.no_grad() # More efficient than wrapping in torch.no_grad() block
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def evaluate(
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model: nn.Module,
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dataloader: DataLoader,
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criterion: nn.Module,
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device: torch.device,
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) -> tuple[float, float]:
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model.eval() # Always set eval mode — disables dropout, uses running BN stats
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total_loss = 0.0
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correct = 0
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total = 0
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for data, target in dataloader:
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data, target = data.to(device), target.to(device)
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output = model(data)
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total_loss += criterion(output, target).item()
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correct += (output.argmax(1) == target).sum().item()
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total += target.size(0)
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return total_loss / len(dataloader), correct / total
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```
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## Data Pipeline Patterns
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### Custom Dataset
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```python
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# Good: Clean Dataset with type hints
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class ImageDataset(Dataset):
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def __init__(
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self,
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image_dir: str,
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labels: dict[str, int],
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transform: transforms.Compose | None = None,
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) -> None:
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self.image_paths = list(Path(image_dir).glob("*.jpg"))
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self.labels = labels
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self.transform = transform
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def __len__(self) -> int:
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return len(self.image_paths)
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def __getitem__(self, idx: int) -> tuple[torch.Tensor, int]:
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img = Image.open(self.image_paths[idx]).convert("RGB")
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label = self.labels[self.image_paths[idx].stem]
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if self.transform:
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img = self.transform(img)
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return img, label
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```
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### Efficient DataLoader Configuration
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```python
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# Good: Optimized DataLoader
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dataloader = DataLoader(
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dataset,
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batch_size=32,
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shuffle=True, # Shuffle for training
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num_workers=4, # Parallel data loading
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pin_memory=True, # Faster CPU->GPU transfer
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persistent_workers=True, # Keep workers alive between epochs
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drop_last=True, # Consistent batch sizes for BatchNorm
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)
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# Bad: Slow defaults
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dataloader = DataLoader(dataset, batch_size=32) # num_workers=0, no pin_memory
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```
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### Custom Collate for Variable-Length Data
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```python
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# Good: Pad sequences in collate_fn
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def collate_fn(batch: list[tuple[torch.Tensor, int]]) -> tuple[torch.Tensor, torch.Tensor]:
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sequences, labels = zip(*batch)
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# Pad to max length in batch
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padded = nn.utils.rnn.pad_sequence(sequences, batch_first=True, padding_value=0)
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return padded, torch.tensor(labels)
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dataloader = DataLoader(dataset, batch_size=32, collate_fn=collate_fn)
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```
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## Checkpointing Patterns
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### Save and Load Checkpoints
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```python
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# Good: Complete checkpoint with all training state
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def save_checkpoint(
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model: nn.Module,
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optimizer: torch.optim.Optimizer,
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epoch: int,
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loss: float,
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path: str,
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) -> None:
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torch.save({
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"epoch": epoch,
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"model_state_dict": model.state_dict(),
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"optimizer_state_dict": optimizer.state_dict(),
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"loss": loss,
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}, path)
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def load_checkpoint(
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path: str,
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model: nn.Module,
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optimizer: torch.optim.Optimizer | None = None,
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) -> dict:
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checkpoint = torch.load(path, map_location="cpu", weights_only=True)
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model.load_state_dict(checkpoint["model_state_dict"])
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if optimizer:
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optimizer.load_state_dict(checkpoint["optimizer_state_dict"])
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return checkpoint
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# Bad: Only saving model weights (can't resume training)
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torch.save(model.state_dict(), "model.pt")
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```
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## Performance Optimization
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### Mixed Precision Training
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```python
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# Good: AMP with GradScaler
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scaler = torch.amp.GradScaler("cuda")
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for data, target in dataloader:
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with torch.amp.autocast("cuda"):
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output = model(data)
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loss = criterion(output, target)
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scaler.scale(loss).backward()
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scaler.step(optimizer)
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scaler.update()
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optimizer.zero_grad(set_to_none=True)
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```
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### Gradient Checkpointing for Large Models
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```python
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# Good: Trade compute for memory
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from torch.utils.checkpoint import checkpoint
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class LargeModel(nn.Module):
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def forward(self, x: torch.Tensor) -> torch.Tensor:
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# Recompute activations during backward to save memory
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x = checkpoint(self.block1, x, use_reentrant=False)
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x = checkpoint(self.block2, x, use_reentrant=False)
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return self.head(x)
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```
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### torch.compile for Speed
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```python
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# Good: Compile the model for faster execution (PyTorch 2.0+)
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model = MyModel().to(device)
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model = torch.compile(model, mode="reduce-overhead")
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# Modes: "default" (safe), "reduce-overhead" (faster), "max-autotune" (fastest)
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```
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## Quick Reference: PyTorch Idioms
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| Idiom | Description |
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|-------|-------------|
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| `model.train()` / `model.eval()` | Always set mode before train/eval |
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| `torch.no_grad()` | Disable gradients for inference |
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| `optimizer.zero_grad(set_to_none=True)` | More efficient gradient clearing |
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| `.to(device)` | Device-agnostic tensor/model placement |
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| `torch.amp.autocast` | Mixed precision for 2x speed |
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| `pin_memory=True` | Faster CPU→GPU data transfer |
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| `torch.compile` | JIT compilation for speed (2.0+) |
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| `weights_only=True` | Secure model loading |
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| `torch.manual_seed` | Reproducible experiments |
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| `gradient_checkpointing` | Trade compute for memory |
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## Anti-Patterns to Avoid
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```python
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# Bad: Forgetting model.eval() during validation
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model.train()
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with torch.no_grad():
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output = model(val_data) # Dropout still active! BatchNorm uses batch stats!
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# Good: Always set eval mode
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model.eval()
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with torch.no_grad():
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output = model(val_data)
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# Bad: In-place operations breaking autograd
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x = F.relu(x, inplace=True) # Can break gradient computation
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x += residual # In-place add breaks autograd graph
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# Good: Out-of-place operations
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x = F.relu(x)
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x = x + residual
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# Bad: Moving data to GPU inside the training loop repeatedly
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for data, target in dataloader:
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model = model.cuda() # Moves model EVERY iteration!
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# Good: Move model once before the loop
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model = model.to(device)
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for data, target in dataloader:
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data, target = data.to(device), target.to(device)
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# Bad: Using .item() before backward
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loss = criterion(output, target).item() # Detaches from graph!
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loss.backward() # Error: can't backprop through .item()
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# Good: Call .item() only for logging
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loss = criterion(output, target)
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loss.backward()
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print(f"Loss: {loss.item():.4f}") # .item() after backward is fine
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# Bad: Not using torch.save properly
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torch.save(model, "model.pt") # Saves entire model (fragile, not portable)
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# Good: Save state_dict
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torch.save(model.state_dict(), "model.pt")
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```
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__Remember__: PyTorch code should be device-agnostic, reproducible, and memory-conscious. When in doubt, profile with `torch.profiler` and check GPU memory with `torch.cuda.memory_summary()`.
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